Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAGGCAGGGGCCGGG
..((((((((((((((((....&)))))))...))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000451
GeneSymbolSHOX
Binding site1498,1518
Score0.808
Seed1
Au0.309
Energy-26.7
Binding len20
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure