Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCCCCAATAATGCAGCTGTAT
.(((((((((.(((((..((.&.))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047429197
GeneSymbolRIMKLB
Binding site1209,1234
Score0.923
Seed1
Au0.559
Energy-19.6
Binding len20
Me-6.618
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure