Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATTGTATAGCCC
....((((((((((((((....&))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000462
GeneSymbolUBE3A
Binding site4574,4590
Score0.846
Seed0
Au0.765
Energy-16.9
Binding len16
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure