Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGGTGCCAGT
..(((((((...((((((....&)))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000489
GeneSymbolATRX
Binding site8520,8535
Score0.846
Seed1
Au0.544
Energy-17.5
Binding len15
Me-12.371
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure