Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCTCGGGGTCCGCCAGGGCCACCAGGAGCCAGTGG
(((((((((((((((((...((&.))..)))))).....))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000494
GeneSymbolCOL17A1
Binding site3485,3522
Score0.974
Seed1
Au0.324
Energy-27.0
Binding len28
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure