Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&CGTTAGAGGAAAGTAATAGTGA
(((((((((((((.....(((&))).....))))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_000522
GeneSymbolHOXA13
Binding site4021,4043
Score0.846
Seed1
Au0.676
Energy-15.1
Binding len22
Me-5.763
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure