Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCAGGGCCGGGGCCGGG
..((((((((.((((((.(...&).))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000523
GeneSymbolHOXD13
Binding site139,158
Score0.846
Seed1
Au0.147
Energy-22.7
Binding len19
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure