Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCCAGGGACATGAGGAGCTGCCTCACAGAGGCTGAGGCTGCAGTGG
(((((((((((((((((.(((.&))).))))).....)))))))......................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000527
GeneSymbolLDLR
Binding site2195,2244
Score0.923
Seed1
Au0.382
Energy-24.1
Binding len49
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings28
Pairings in 3prime end6
PositionCDS
2D Structure