Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGC
.((((((((((((((((....&))))))))))......................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330470
GeneSymbolMTUS1
Binding site470,509
Score1.0
Seed1
Au0.603
Energy-17.8
Binding len39
Me-3.793
Phylopstem0.643157894736842
Phylopflank0.2779
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end4
PositionCDS
2D Structure