Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGAGTGTGCCGGT
..(((((((((..(((......&)))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000545
GeneSymbolHNF1A
Binding site1554,1569
Score0.846
Seed1
Au0.353
Energy-17.6
Binding len15
Me-9.593
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure