Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CACGGGCTGCCAGGTT
((((((((..(..((.......&))..)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000547
GeneSymbolTPO
Binding site1844,1860
Score0.846
Seed1
Au0.353
Energy-15.4
Binding len16
Me-11.105
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure