Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGACACGGAAGCTCTGCACTGGAGGCCGGGA
.((((((...((.((((((...&.)))))).))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000554
GeneSymbolCRX
Binding site3831,3862
Score0.923
Seed1
Au0.441
Energy-20.9
Binding len20
Me-9.695
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure