Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGTGGGCCGGG
..(((((((.(((((((((...&))))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000554
GeneSymbolCRX
Binding site3330,3348
Score0.827
Seed1
Au0.368
Energy-27.0
Binding len18
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure