Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGG
((((((((((((..(((((...&.))))))))))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001347885
GeneSymbolGVQW3
Binding site2537,2587
Score0.923
Seed1
Au0.515
Energy-24.8
Binding len21
Me-6.084
Phylopstem-0.09150395714285715
Phylopflank0.08915032
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure