Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATATTAAGGCAGTATGCCAAGGG
.((((((((((((((((((...&))))))))......)))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000614
GeneSymbolCNTF
Binding site1172,1198
Score0.923
Seed1
Au0.691
Energy-20.0
Binding len26
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end5
Position3UTR
2D Structure