Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATCGTTTTGGGTTCTCTTGGCTGTTACTGCCAGGA
.(((((((.((((((((((...&)))))))...................)))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000619
GeneSymbolIFNG
Binding site159,199
Score0.923
Seed1
Au0.559
Energy-18.6
Binding len40
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end5
PositionCDS
2D Structure