Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTTCATTAGCCGGGACTGGCACGGTGTGCCAGGG
.((((((((((..(((......&.)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000638
GeneSymbolVTN
Binding site1101,1136
Score0.923
Seed1
Au0.338
Energy-22.8
Binding len17
Me-8.429
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure