Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACATAGATTAGTGGTTGCCAGGG
.(((((((..((..........&.))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000692
GeneSymbolALDH1B1
Binding site2496,2521
Score1.0
Seed1
Au0.544
Energy-17.2
Binding len13
Me-9.207
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure