Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGACAGGGCCGTCTGGGATGCTAGTT
.((((((((((((((((((...&))))))))...........)))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000706
GeneSymbolAVPR1A
Binding site5222,5253
Score0.846
Seed1
Au0.441
Energy-23.2
Binding len31
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end5
Position3UTR
2D Structure