Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTTACTGTGCCAGGA
.(((((((((....((((((((&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000721
GeneSymbolCACNA1E
Binding site9540,9558
Score0.923
Seed1
Au0.647
Energy-19.4
Binding len18
Me-12.111
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure