Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATCGGATGCCAGGG
.(((((((..(.((((......&)))).)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000721
GeneSymbolCACNA1E
Binding site7591,7607
Score0.846
Seed1
Au0.397
Energy-18.3
Binding len16
Me-9.439
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure