Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGGAAAGGCCGGTGG
((((((((..((((((((....&)))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000738
GeneSymbolCHRM1
Binding site1640,1658
Score0.821
Seed1
Au0.294
Energy-24.5
Binding len18
Me-6.236
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure