Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGCCAGTGGCCAGGG
.((((((.(((...(((((...&))))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000743
GeneSymbolCHRNA3
Binding site273,293
Score1.0
Seed1
Au0.382
Energy-18.4
Binding len20
Me-11.6
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure