Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCAACACTAAGGAGCTGGTA
.(((((((((((..(((((((.&)))))..))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001347886
GeneSymbolDNAH3
Binding site2277,2300
Score1.0
Seed1
Au0.559
Energy-24.1
Binding len23
Me-5.939
Phylopstem0.18612503636363636
Phylopflank0.23847156474999992
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure