Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAGCAATGGATACGTGCAAACATGTTGGGCAGCTGCAGCTTGCT
..((((((((((((((.....&.)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047429646
GeneSymbolUSP44
Binding site277,323
Score1.0
Seed1
Au0.485
Energy-23.7
Binding len17
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end3
PositionCDS
2D Structure