Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGTCTCCAAGATCAACTCCTTGGCATCGTGGCTGCGAA
(((((((((((((..(((((.&.)))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347886
GeneSymbolDNAH3
Binding site9765,9808
Score1.0
Seed1
Au0.471
Energy-25.7
Binding len22
Me-5.53
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure