Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATGAGCAGCTGTGGT
((((((((((..(((((((((&))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347886
GeneSymbolDNAH3
Binding site2773,2793
Score0.846
Seed1
Au0.529
Energy-22.3
Binding len20
Me-10.109
Phylopstem0.08332252
Phylopflank0.12702960375000003
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure