Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTATGTGCCAGGA
.(((((((((....((((....&))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000856
GeneSymbolGUCY1A1
Binding site5372,5388
Score0.923
Seed1
Au0.721
Energy-19.1
Binding len16
Me-12.111
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure