Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGGAGGTGGAGGTTGCCGTGAGCCAA
...((((((((((((((((...&)))))))))).............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000861
GeneSymbolHRH1
Binding site2911,2941
Score0.846
Seed0
Au0.382
Energy-22.5
Binding len30
Me-6.515
Phylopstem-0.024354568965517232
Phylopflank-0.07841468675
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end5
Position3UTR
2D Structure