Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCTCTGTTGTCAGGACAACCTTGAAGGAAGGAGCCAAATGTGT
(((((((((((((((((((...&.))))...))))))))))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000864
GeneSymbolHTR1D
Binding site917,963
Score0.885
Seed1
Au0.485
Energy-25.5
Binding len27
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure