Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGAGATGTCGGA
..(((((((((((((((((...&)))))))))).)).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000864
GeneSymbolHTR1D
Binding site1534,1554
Score0.923
Seed1
Au0.397
Energy-23.7
Binding len20
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure