Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACGCCAGGAAGAGGACGGCCAA
...(((((((((((((((((..&))).)))))))).)...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000865
GeneSymbolHTR1E
Binding site868,891
Score0.808
Seed0
Au0.441
Energy-19.7
Binding len23
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure