Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCACATACAGATGGTGTCCTGCATGTATGCCATGTA
((.((((((((.((((((....&.)))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000868
GeneSymbolHTR2C
Binding site4010,4049
Score0.923
Seed0
Au0.603
Energy-21.2
Binding len19
Me-8.842
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure