Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGTCTGGGAGGGAGCTT
....((((((((((((((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000868
GeneSymbolHTR2C
Binding site1934,1953
Score0.872
Seed0
Au0.529
Energy-21.2
Binding len19
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure