Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGGG
.((((((((.(..((.......&.))..).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000869
GeneSymbolHTR3A
Binding site1713,1750
Score0.846
Seed1
Au0.471
Energy-17.0
Binding len16
Me-9.905
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure