Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGGAAGGTAAATGCCAAACCCAGAGCCATGTGA
((((((((((((((((((....&))))))))))................))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000870
GeneSymbolHTR4
Binding site3099,3135
Score1.0
Seed1
Au0.515
Energy-24.4
Binding len36
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end4
Position3UTR
2D Structure