Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCAGAAACAACTATATATTTCAGGTTATCTGAGCACAGTGA
(((((((((.(((((((((((.&))))))))))).......................)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000885
GeneSymbolITGA4
Binding site5112,5157
Score0.846
Seed1
Au0.618
Energy-24.4
Binding len45
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings34
Pairings in 3prime end7
Position3UTR
2D Structure