Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCTGGGAGAGAGGGGATGGGCAGGATGTCAGTGC
(((((((((((((((((((...&))))....))))))))............))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000906
GeneSymbolNPR1
Binding site1290,1326
Score0.846
Seed1
Au0.368
Energy-21.7
Binding len36
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure