Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGAGGCAACCGTGGCAGAGGCAC
.(((.(((((((((((.....&.)))))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047429884
GeneSymbolSCAF11
Binding site5439,5464
Score0.846
Seed0
Au0.515
Energy-19.5
Binding len20
Me-7.912
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure