Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTGGAAGCAGCTGACATGCTGGTGGACGGCCGTGACTGGAGCCCGTGC
(((.(((((((((((((((((.&)))))))))))..............................)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000913
GeneSymbolOPRL1
Binding site1690,1742
Score0.846
Seed0
Au0.338
Energy-25.8
Binding len52
Me-6.97
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings41
Pairings in 3prime end7
Position3UTR
2D Structure