Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTAGCGTTTGCCAGGG
.(((((((...(((((.(((((&))))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000916
GeneSymbolOXTR
Binding site4192,4211
Score0.846
Seed1
Au0.544
Energy-17.7
Binding len19
Me-8.917
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure