Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTGGGCAGTGAGTGG
((((.((((((....((((((.&)))))).))).))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000916
GeneSymbolOXTR
Binding site2029,2049
Score0.846
Seed0
Au0.485
Energy-21.7
Binding len20
Me-14.285
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure