Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGCTAGAGTGCAGTGG
(((((((((...(((((((((.&)))))))))...)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000961
GeneSymbolPTGIS
Binding site4340,4363
Score0.923
Seed1
Au0.382
Energy-26.7
Binding len23
Me-11.352
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure