Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTCTACCCCCAATGGCAGCTGCC
..((((((((.((((...(((&.)))..)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047429921
GeneSymbolCLSTN3
Binding site3262,3289
Score0.923
Seed1
Au0.412
Energy-23.7
Binding len20
Me-8.015
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure