Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGCCCAGAAGGGTGCAGGCTGAGGGCTGGGCCCTGGGCCCTGGTGC
((((((((((((((((((((((&)))).)))))))))).......................))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000991
GeneSymbolRPL28
Binding site793,842
Score0.846
Seed1
Au0.338
Energy-25.7
Binding len49
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end8
Position3UTR
2D Structure