Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCAACAGCATTAGCGGCAGTGTGCCAGGTG
(((((((((((..(((.(((..&.))).)))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001001132
GeneSymbolITSN1
Binding site3692,3725
Score0.923
Seed1
Au0.456
Energy-21.5
Binding len23
Me-8.574
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure