Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATCCAGCCAGGAGACATAGTC
.((((((((((..((((((((.&))))))))..))))).).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001001132
GeneSymbolITSN1
Binding site2523,2546
Score0.846
Seed1
Au0.544
Energy-22.1
Binding len23
Me-8.429
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure