Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCGGGGCTGGTC
.(((((((((..(((((((...&))))))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001001329
GeneSymbolPRKCSH
Binding site1869,1887
Score0.846
Seed1
Au0.324
Energy-24.4
Binding len18
Me-9.965
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure