Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTGTTGCCAGC
..((((((.(((..((((....&))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001001414
GeneSymbolNCCRP1
Binding site1180,1196
Score0.846
Seed1
Au0.441
Energy-17.1
Binding len16
Me-8.159
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure