Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAAGGGAGCTGCAGG
..((((((((((((((((....&)))))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001001433
GeneSymbolSTX16
Binding site165,184
Score0.923
Seed1
Au0.338
Energy-27.5
Binding len19
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure